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Academic Journal

The Evolutionary Traceability of a Protein.

  • Authors : Jain A; Applied Bioinformatics Group, Institute of Cell Biology & Neuroscience, Goethe University, Frankfurt, Germany.; Perisa D

Subjects: Evolution, Molecular* ; Models, Genetic* ; Software*

  • Source: Genome biology and evolution [Genome Biol Evol] 2019 Feb 01; Vol. 11 (2), pp. 531-545.Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

TLR2 and TLR4 differentially regulate B7-1 resulting in distinct cytokine responses to the mycoplasma superantigen MAM as well as to disease induced by Mycoplasma arthritidis.

  • Authors : Mu HH; Division of Rheumatology, Department of Internal Medicine, University of Utah School of Medicine, 30 North 1900 East, Salt Lake City, UT 84132, USA. ; Humphreys J

Subjects: Gene Expression Regulation*; Arthritis, Infectious/Arthritis, Infectious/Arthritis, Infectious/*physiopathology ; B7-1 Antigen/B7-1 Antigen/B7-1 Antigen/*metabolism

  • Source: Cellular microbiology [Cell Microbiol] 2006 Mar; Vol. 8 (3), pp. 414-26.Publisher: Hindawi Country of Publication: India NLM ID: 100883691 Publication Model: Print Cited Medium: Print ISSN: 1462-5814 (Print)

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Academic Journal

Thermodynamics of Macromolecular Association in Heterogeneous Crowding Environments: Theoretical and Simulation Studies with a Simplified Model.

  • Authors : Ando T; RIKEN Quantitative Biology Center (QBiC), Integrated Innovation Building 7F, 6-7-1 Minatojima-minamimachi, Chuo-ku, Kobe, Hyogo 650-0047, Japan.; Yu I

Subjects: Molecular Dynamics Simulation* ; Thermodynamics*; Proteins/Proteins/Proteins/*chemistry

  • Source: The journal of physical chemistry. B [J Phys Chem B] 2016 Nov 23; Vol. 120 (46), pp. 11856-11865. Date of Electronic Publication: 2016 Nov 15.Publisher: American Chemical Society Country of Publication: United States NLM ID: 101157530 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Mycoplasma hyorhinis upregulates calpastatin and inhibits calpain-dependent proteolysis in SH-SY5Y neuroblastoma cells.

  • Authors : Elkind E; Department of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel-Aviv University, Ramat-Aviv, Tel-Aviv, Israel.; Rechnitzer H

Subjects: Host-Pathogen Interactions* ; Up-Regulation*; Calcium-Binding Proteins/Calcium-Binding Proteins/Calcium-Binding Proteins/*metabolism

  • Source: FEMS microbiology letters [FEMS Microbiol Lett] 2010 Mar; Vol. 304 (1), pp. 62-8. Date of Electronic Publication: 2010 Jan 20.Publisher: Oxford University Press Country of Publication: England NLM ID: 7705721 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Visual account of protein investment in cellular functions.

  • Authors : Liebermeister W; Institut für Biochemie, Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany;Department of Plant Sciences, Weizmann Institute of Science, Rehovot 76100, Israel

Subjects: Signal Transduction*; Proteins/Proteins/Proteins/*analysis ; Proteome/Proteome/Proteome/*analysis

  • Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2014 Jun 10; Vol. 111 (23), pp. 8488-93. Date of Electronic Publication: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Enhanced genome annotation using structural profiles in the program 3D-PSSM.

  • Authors : Kelley LA; Biomolecular Modelling Laboratory, Imperial Cancer Research Fund, 44 Lincoln's Inn Fields, London, WC2A 3PX, England.; MacCallum RM

Subjects: Genome, Bacterial* ; Proteome* ; Software*

  • Source: Journal of molecular biology [J Mol Biol] 2000 Jun 02; Vol. 299 (2), pp. 499-520.Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print Cited Medium: Print ISSN: 0022-2836 (Print)

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Academic Journal

Global secretome characterization of A549 human alveolar epithelial carcinoma cells during Mycoplasma pneumoniae infection.

Subjects: Epithelial Cells/Epithelial Cells/Epithelial Cells/*immunology ; Epithelial Cells/Epithelial Cells/Epithelial Cells/*microbiology ; Mycoplasma pneumoniae/Mycoplasma pneumoniae/Mycoplasma pneumoniae/*growth & development

  • Source: BMC microbiology [BMC Microbiol] 2014 Feb 07; Vol. 14, pp. 27. Date of Electronic Publication: 2014 Feb 07.Publisher: BioMed Central Country of Publication: England NLM ID: 100966981 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2180

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Academic Journal

Critical assessment of proteome-wide label-free absolute abundance estimation strategies.

  • Authors : Ahrné E; Proteomics Core Facility, Biozentrum, University of Basel, Basel, Switzerland.; Molzahn L

Subjects: Chromatography, Liquid/Chromatography, Liquid/Chromatography, Liquid/*methods ; Mass Spectrometry/Mass Spectrometry/Mass Spectrometry/*methods ; Proteins/Proteins/Proteins/*metabolism

  • Source: Proteomics [Proteomics] 2013 Sep; Vol. 13 (17), pp. 2567-78. Date of Electronic Publication: 2013 Jul 30.Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101092707 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1615-9861

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Academic Journal

Protein charge and mass contribute to the spatio-temporal dynamics of protein-protein interactions in a minimal proteome.

  • Authors : Xu Y; Institute of Chinese Minority Traditional Medicine, Minzu University of China, Beijing, P. R. China.; Wang H

Subjects: Models, Biological* ; Proteome*; Protein Interaction Maps/Protein Interaction Maps/Protein Interaction Maps/*physiology

  • Source: Proteomics [Proteomics] 2013 Apr; Vol. 13 (8), pp. 1339-51. Date of Electronic Publication: 2013 Mar 18.Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101092707 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1615-9861

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Academic Journal

Crystal structure of a complete ternary complex of TCR, superantigen and peptide-MHC.

  • Authors : Wang L; Wadsworth Center, New York State Department of Health, Albany, New York 12201, USA.; Zhao Y

Subjects: HLA-DR1 Antigen/HLA-DR1 Antigen/HLA-DR1 Antigen/*chemistry ; Hemagglutinins/Hemagglutinins/Hemagglutinins/*chemistry ; Mitogens/Mitogens/Mitogens/*chemistry

  • Source: Nature structural & molecular biology [Nat Struct Mol Biol] 2007 Feb; Vol. 14 (2), pp. 169-71. Date of Electronic Publication: 2007 Jan 14.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101186374 Publication Model: Print-Electronic Cited Medium: Print ISSN:

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