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Academic Journal

Bioinformatics Prediction and Experimental Validation of MicroRNAs Involved in Cross-Kingdom Interaction.

  • Authors : Pirrò S; 1 Department of Biology, University of Rome 'Tor Vergata ,' Rome, Italy .; 2 Mir-Nat s.r.l. , Rome, Italy .

Subjects: Algorithms* ; Gene Expression Regulation*; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2016 Dec; Vol. 23 (12), pp. 976-989. Date of Electronic Publication: 2016 Jul Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Prediction of Potential Associations Between MicroRNA and Disease Based on Bayesian Probabilistic Matrix Factorization Model.

  • Authors : Mao G; College of Computer Science and Electronics Engineering, Hunan University, Changsha, China.; Wang SL

Subjects: Algorithms* ; Genetic Predisposition to Disease*; Genomics/Genomics/Genomics/*methods

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2019 Sep; Vol. 26 (9), pp. 1030-1039. Date of Electronic Publication: 2019 Jun Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Dynamic modeling of miRNA-mediated feed-forward loops.

  • Authors : Eduati F; Department of Information Engineering, University of Padova, Padova, Italy.; Di Camillo B

Subjects: Algorithms* ; Computer Simulation* ; Gene Expression Regulation*

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2012 Feb; Vol. 19 (2), pp. 188-99.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print Cited Medium:

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Academic Journal

A New ℓ 0 -Regularized Log-Linear Poisson Graphical Model with Applications to RNA Sequencing Data.

  • Authors : Li CZ; Department of Biostatistics, School of Public Health, University of California at Los Angeles, Los Angeles, California, USA.; Kawaguchi ES

Subjects: Algorithms* ; Linear Models*; Neoplasms/Neoplasms/Neoplasms/*genetics

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2021 Sep; Vol. 28 (9), pp. 880-891. Date of Electronic Publication: 2021 Aug Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Computing the partition function and sampling for saturated secondary structures of RNA, with respect to the Turner energy model.

  • Authors : Waldispühl J; Department of Biology, Boston College, Chestnut Hill, Massachusetts, USA.; Clote P

Subjects: Algorithms* ; Models, Molecular* ; Nucleic Acid Conformation*

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2007 Mar; Vol. 14 (2), pp. 190-215.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print Cited Medium:

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Academic Journal

A study of accessible motifs and RNA folding complexity.

  • Authors : Wexler Y; Department of Computer Science, Technion-Israel Institute of Technology, Haifa, Israel. ; Zilberstein C

Subjects: Algorithms* ; Regulatory Sequences, Ribonucleic Acid*; RNA/RNA/RNA/*chemistry

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2007 Jul-Aug; Vol. 14 (6), pp. 856-72.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print Cited Medium:

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Academic Journal

An Efficient Dual Sampling Algorithm with Hamming Distance Filtration.

  • Authors : Barrett C; 1 Biocomplexity Institute of Virginia Tech , Blacksburg, Virginia.; 2 Department of Computer Science, Virginia Tech , Blacksburg, Virginia.

Subjects: Algorithms*; Computational Biology/Computational Biology/Computational Biology/*methods ; RNA/RNA/RNA/*chemistry

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2018 Nov; Vol. 25 (11), pp. 1179-1192. Date of Electronic Publication: 2018 AugPublisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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