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Academic Journal

PPGR: a comprehensive perennial plant genomes and regulation database.

  • Authors : Yang S; State Key Laboratory of Tree Genetics and Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.; National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.

Subjects: Databases, Genetic* ; Genome, Plant* ; Genomics*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jan 05; Vol. 52 (D1), pp. D1588-D1596.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Recent Advances in Assembly of Complex Plant Genomes.

  • Authors : Kong W; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.; Wang Y

Subjects: Genomics* ; Genome, Plant*; Sequence Analysis, DNA

  • Source: Genomics, proteomics & bioinformatics [Genomics Proteomics Bioinformatics] 2023 Jun; Vol. 21 (3), pp. 427-439. Date of Publisher: Science Press and Elsevier Country of Publication: England NLM ID: 101197608 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

De novo phasing resolves haplotype sequences in complex plant genomes.

  • Authors : Guk JY; Department of Environmental Horticulture, University of Seoul, Seoul, Korea.; Jang MJ

Subjects: Genome, Plant*/Genome, Plant*/Genome, Plant*/genetics ; Genomics*; Alleles

  • Source: Plant biotechnology journal [Plant Biotechnol J] 2022 Jun; Vol. 20 (6), pp. 1031-1041. Date of Electronic Publication: Publisher: Wiley on behalf of the Society for Experimental Biology, Association of Applied Biologists Country of Publication: England NLM ID: 101201889 Publication

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Academic Journal

GreenPhylDB v5: a comparative pangenomic database for plant genomes.

  • Authors : Valentin G; Bioversity International, Parc Scientifique Agropolis II, 34397 Montpellier, France.; French Institute of Bioinformatics (IFB)-South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD, F-34398 Montpellier France.

Subjects: Databases, Genetic* ; Gene Expression Regulation, Plant* ; Genome, Plant*

  • Source: Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D1464-D1471.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Hecaton: reliably detecting copy number variation in plant genomes using short read sequencing data.

  • Authors : Wijfjes RY; Bioinformatics Group, Wageningen University & Research, Wageningen, the Netherlands. .; Smit S

Subjects: DNA Copy Number Variations* ; Sequence Analysis, DNA* ; Software*

  • Source: BMC genomics [BMC Genomics] 2019 Nov 07; Vol. 20 (1), pp. 818. Date of Electronic Publication: 2019 Nov 07.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

Retrotransposons in Plant Genomes: Structure, Identification, and Classification through Bioinformatics and Machine Learning.

  • Authors : Orozco-Arias S; Department of Computer Science, Universidad Autónoma de Manizales, Manizales 170001, Colombia.; Department of Systems and Informatics, Universidad de Caldas, Manizales 170001, Colombia.

Subjects: Genome, Plant* ; Genomics*/Genomics*/Genomics*/methods ; Retroelements*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2019 Aug 06; Vol. 20 (15). Date of Electronic Publication: 2019 Aug 06.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

Haplotype-resolved genome assembly of Phanera championii reveals molecular mechanisms of flavonoid synthesis and adaptive evolution.

  • Authors : Lu Y; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, Guangxi University, Nanning, 530004, China.; Guangxi Key Laboratory of Plant Conservation and Restoration Ecology in Karst Terrain, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and the Chinese Academy of Sciences, Yanshan, Guilin, 541006, China.

Subjects: Genome, Plant*/Genome, Plant*/Genome, Plant*/genetics ; Genomics*; Haplotypes

  • Source: The Plant journal : for cell and molecular biology [Plant J] 2024 Apr; Vol. 118 (2), pp. 488-505. Date of Electronic Publisher: Blackwell Scientific Publishers and BIOS Scientific Publishers in association with the Society for Experimental Biology Country of Publication: England NLM ID:

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Academic Journal

Computational analysis of alternative splicing in plant genomes.

  • Authors : Song QA; Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, United States of America.; Catlin NS

Subjects: Alternative Splicing* ; Gene Expression Regulation, Plant* ; Genome, Plant*

  • Source: Gene [Gene] 2019 Feb 15; Vol. 685, pp. 186-195. Date of Electronic Publication: 2018 Oct 12.Publisher: Elsevier/North-Holland Country of Publication: Netherlands NLM ID: 7706761 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Design and evaluation of a sequence capture system for genome-wide SNP genotyping in highly heterozygous plant genomes: a case study with a keystone Neotropical hardwood tree genome.

  • Authors : Silva-Junior OB; EMBRAPA Recursos Genéticos e Biotecnologia, EPqB, Brasília, DF, Brazil.; Programa de Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, SGAN 916 Modulo B, Brasilia, DF, Brazil.

Subjects: Evolution, Molecular* ; Genome, Plant* ; Genomics*/Genomics*/Genomics*/methods

  • Source: DNA research : an international journal for rapid publication of reports on genes and genomes [DNA Res] 2018 Oct 01; Vol. 25 (5), pp. 535-545.Publisher: Oxford University Press Country of Publication: England NLM ID: 9423827 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

From plant genomes to phenotypes.

  • Authors : Bolger M; Forschungszentrum Jülich (FZJ), Institute of Bio- and Geosciences (IBG-2) Plant Sciences, Wilhelm-Johnen-Straße, 52425 Jülich, Germany.; Schwacke R

Subjects: Genomics* ; Molecular Sequence Annotation* ; Phenotype*

  • Source: Journal of biotechnology [J Biotechnol] 2017 Nov 10; Vol. 261, pp. 46-52. Date of Electronic Publication: 2017 Jun 09.Publisher: Elsevier Science Publishers Country of Publication: Netherlands NLM ID: 8411927 Publication Model: Print-Electronic Cited Medium: Internet

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  • 1-10 of  5,403 results for ""PLANT genomes""