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Academic Journal

Labeled Cycle Graph for Transposition and Indel Distance.

Subjects: Genome* ; INDEL Mutation*; Algorithms

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2022 Mar; Vol. 29 (3), pp. 243-256. Date of Electronic Publication: 2021 Nov Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Genome Rearrangement Distance with Reversals, Transpositions, and Indels.

Subjects: Gene Rearrangement/Gene Rearrangement/Gene Rearrangement/*genetics ; Genome/Genome/Genome/*genetics ; INDEL Mutation/INDEL Mutation/INDEL Mutation/*genetics

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2021 Mar; Vol. 28 (3), pp. 235-247. Date of Electronic Publication: 2020 Oct Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Development and Characterization of a Modular CRISPR and RNA Aptamer Mediated Base Editing System.

  • Authors : Collantes JC; Department of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.; Tan VM

Subjects: Aptamers, Nucleotide* ; Clustered Regularly Interspaced Short Palindromic Repeats* ; Gene Editing*

  • Source: The CRISPR journal [CRISPR J] 2021 Feb; Vol. 4 (1), pp. 58-68.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101738191 Publication Model: Print Cited

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Academic Journal

Deconvolution of Complex DNA Repair (DECODR): Establishing a Novel Deconvolution Algorithm for Comprehensive Analysis of CRISPR-Edited Sanger Sequencing Data.

  • Authors : Bloh K; Gene Editing Institute, Helen F. Graham Cancer Center and Research Institute, ChristianaCare, Newark, Delaware, USA.; Department of Medical and Molecular Sciences, College of Health Sciences University of Delaware, Newark, Delaware, USA.

Subjects: Algorithms* ; CRISPR-Cas Systems* ; Clustered Regularly Interspaced Short Palindromic Repeats*

  • Source: The CRISPR journal [CRISPR J] 2021 Feb; Vol. 4 (1), pp. 120-131. Date of Electronic Publication: 2021 Feb 10.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101738191 Publication Model: Print-Electronic

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Academic Journal

Tracking of Indels by DEcomposition is a Simple and Effective Method to Assess Efficiency of Guide RNAs in Zebrafish.

  • Authors : Etard C; 1 Institute of Toxicology and Genetics (ITG), Karlsruhe Institute of Technology (KIT) , Eggenstein-Leopoldshafen, Germany .; Joshi S

Subjects: INDEL Mutation*; Genetic Techniques/Genetic Techniques/Genetic Techniques/*veterinary ; RNA, Guide/RNA, Guide/RNA, Guide/*genetics

  • Source: Zebrafish [Zebrafish] 2017 Dec; Vol. 14 (6), pp. 586-588. Date of Electronic Publication: 2017 Aug 02.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101225070 Publication Model: Print-Electronic

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Academic Journal

Evolutionary Relationships and Taxa-Specific Conserved Signature Indels Among Cellulases of Archaea, Bacteria, and Eukarya.

  • Authors : Thomas L; Applied Microbiology and Biotechnology Laboratory, Department of Botany, University of Delhi , Delhi, India .; Ram H

Subjects: Evolution, Molecular* ; INDEL Mutation*; Archaea/Archaea/Archaea/*enzymology

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2017 Oct; Vol. 24 (10), pp. 1029-1042. Date of Electronic Publication: 2017 FebPublisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Tumor Mutation Burden Computation in Two Pan-Cancer Precision Medicine Next-Generation Sequencing Panels.

  • Authors : Shu Y; Department of Oncology, the First Affiliated Hospital of Nanjing Medical University, Nanjing, China.; Jiangsu Key Lab of Cancer Biomarkers, Prevention, and Treatment, Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing, China.

Subjects: Mutation*; Biomarkers, Tumor/Biomarkers, Tumor/Biomarkers, Tumor/*genetics ; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2020 Oct; Vol. 27 (10), pp. 1553-1560. Date of Electronic Publication: 2020 AprPublisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

Identifying the Impact of Inframe Insertions and Deletions on Protein Function in Cancer.

  • Authors : Baeissa HM; Bioinformatics Group, School of Life Sciences, University of Sussex, Brighton, United Kingdom.; Pearl FMG

Subjects: Computational Biology/Computational Biology/Computational Biology/*methods ; INDEL Mutation/INDEL Mutation/INDEL Mutation/*genetics ; Neoplasm Proteins/Neoplasm Proteins/Neoplasm Proteins/*genetics

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2020 May; Vol. 27 (5), pp. 786-795. Date of Electronic Publication: 2019 Aug Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic

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Academic Journal

A Tandem Guide RNA-Based Strategy for Efficient CRISPR Gene Editing of Cell Populations with Low Heterogeneity of Edited Alleles.

Subjects: CRISPR-Cas Systems/CRISPR-Cas Systems/CRISPR-Cas Systems/*genetics ; Gene Editing/Gene Editing/Gene Editing/*methods ; Gene Knockout Techniques/Gene Knockout Techniques/Gene Knockout Techniques/*methods

  • Source: The CRISPR journal [CRISPR J] 2020 Apr; Vol. 3 (2), pp. 123-134.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101738191 Publication Model: Print Cited

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Academic Journal

Association Between the Angiotensin-Converting Enzyme Gene Insertion/Deletion Polymorphism and Avascular Necrosis of the Femoral Head.

  • Authors : Zhang Y; Department of Orthopedics, The Affiliated Hospital of Qingdao University, Qingdao, P.R. China.; Zhao Z

Subjects: Femur Head Necrosis/Femur Head Necrosis/Femur Head Necrosis/*genetics ; Peptidyl-Dipeptidase A/Peptidyl-Dipeptidase A/Peptidyl-Dipeptidase A/*genetics; Adult

  • Source: Genetic testing and molecular biomarkers [Genet Test Mol Biomarkers] 2019 Nov; Vol. 23 (11), pp. 778-782. Date of Electronic Publication: 2019 Oct 18.Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101494210 Publication Model: Print-Electronic

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