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Academic Journal

Assessment of phylo-functional coherence along the bacterial phylogeny and taxonomy.

Subjects: Microbiota* ; Phylogeny*; Bacteria/Bacteria/Bacteria/*classification

  • Source: Scientific reports [Sci Rep] 2021 Apr 15; Vol. 11 (1), pp. 8299. Date of Electronic Publication: 2021 Apr 15.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Phylogeny and diversity of alkane-degrading enzyme gene variants in the laurentian great lakes and western atlantic.

  • Authors : Christian WC; Department of Biological Sciences, Michigan Technological University, 1400 Townsend Drive Houghton MI 49931 USA.; Butler TM

Subjects: Bacteria*/Bacteria*/Bacteria*/classification ; Bacteria*/Bacteria*/Bacteria*/enzymology ; Bacteria*/Bacteria*/Bacteria*/genetics

  • Source: FEMS microbiology letters [FEMS Microbiol Lett] 2020 Dec 22; Vol. 367 (23).Publisher: Oxford University Press Country of Publication: England NLM ID: 7705721 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.

  • Authors : Wylensek D; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany.; Hitch TCA

Subjects: Gastrointestinal Microbiome*/Gastrointestinal Microbiome*/Gastrointestinal Microbiome*/genetics ; Phylogeny*; Bacteria/Bacteria/Bacteria/*classification

  • Source: Nature communications [Nat Commun] 2020 Dec 15; Vol. 11 (1), pp. 6389. Date of Electronic Publication: 2020 Dec 15.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Accurate reconstruction of bacterial pan- and core genomes with PEPPAN.

  • Authors : Zhou Z; Warwick Medical School, University of Warwick, Coventry CV4 7AL, United Kingdom.; Charlesworth J

Subjects: Genome, Bacterial* ; Phylogeny*; Bacteria/Bacteria/Bacteria/*classification

  • Source: Genome research [Genome Res] 2020 Nov; Vol. 30 (11), pp. 1667-1679. Date of Electronic Publication: 2020 Oct 14.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Print-Electronic Cited Medium:

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Academic Journal

Expanding magnetic organelle biogenesis in the domain Bacteria.

  • Authors : Lin W; Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing, 100029, China. .; Innovation Academy for Earth Science, Chinese Academy of Sciences, Beijing, 100029, China. .

Subjects: Organelle Biogenesis* ; Phylogeny*; Bacteria/Bacteria/Bacteria/*classification

  • Source: Microbiome [Microbiome] 2020 Oct 30; Vol. 8 (1), pp. 152. Date of Electronic Publication: 2020 Oct 30.Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618

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Academic Journal

Horizontal gene transfer in human-associated microorganisms inferred by phylogenetic reconstruction and reconciliation.

  • Authors : Jeong H; Department of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.; School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, United States.

Subjects: Gene Transfer, Horizontal* ; Genes, Bacterial* ; Genome, Bacterial*

  • Source: Scientific reports [Sci Rep] 2019 Apr 11; Vol. 9 (1), pp. 5953. Date of Electronic Publication: 2019 Apr 11.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Phylogenetic barriers to horizontal transfer of antimicrobial peptide resistance genes in the human gut microbiota.

  • Authors : Kintses B; Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary. .; Méhi O

Subjects: Gene Transfer, Horizontal* ; Genes, Bacterial* ; Phylogeny*

  • Source: Nature microbiology [Nat Microbiol] 2019 Mar; Vol. 4 (3), pp. 447-458. Date of Electronic Publication: 2018 Dec 17.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Phylogenetic signature of lateral exchange of genes for antibiotic production and resistance among bacteria highlights a pattern of global transmission of pathogens between humans and livestock.

  • Authors : Chen Y; Department of Biological Sciences, College of Science, Clemson University, Clemson, SC 29634, United States. Electronic address: .; Hammer EE

Subjects: Genes, Bacterial* ; Livestock* ; Phylogeny*

  • Source: Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2018 Aug; Vol. 125, pp. 255-264. Date of Electronic Publication: 2018 Apr 06.Publisher: Academic Press Country of Publication: United States NLM ID: 9304400 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

The rise of diversity in metabolic platforms across the Candidate Phyla Radiation.

  • Authors : Jaffe AL; Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA, USA.; Castelle CJ

Subjects: Evolution, Molecular* ; Gene Transfer, Horizontal* ; Genome, Bacterial*

  • Source: BMC biology [BMC Biol] 2020 Jun 19; Vol. 18 (1), pp. 69. Date of Electronic Publication: 2020 Jun 19.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Taxonomic differences shape the responses of freshwater aerobic anoxygenic phototrophic bacterial communities to light and predation.

  • Authors : Ruiz-González C; Institut de Ciències del Mar (ICM-CSIC), Barcelona, Spain.; Groupe de Recherche Interuniversitaire en Limnologie et en Environnement Aquatique (GRIL), Département des Sciences Biologiques, Université du Québec à Montréal, Montréal, QC, Canada.

Subjects: Food Chain* ; Light* ; Phototrophic Processes*

  • Source: Molecular ecology [Mol Ecol] 2020 Apr; Vol. 29 (7), pp. 1267-1283. Date of Electronic Publication: 2020 Apr 03.Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet

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