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rworkflows: automating reproducible practices for the R community.

• Authors : Schilder BM; Department of Brain Sciences, Faculty of Medicine, Imperial College London, London, W12 0BZ, UK. .; UK Dementia Research Institute at Imperial College London, London, W12 0BZ, UK. .

• Source: Nature communications [Nat Commun] 2024 Jan 02; Vol. 15 (1), pp. 149. Date of Electronic Publication: 2024 Jan 02.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN:

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EpiCompare: R package for the comparison and quality control of epigenomic peak files.

• Authors : Choi S; Department of Brain Sciences, Faculty of Medicine, Imperial College London, London W12 0BZ, UK.; UK Dementia Research Institute at Imperial College London, London W12 0BZ, UK.

• Source: Bioinformatics advances [Bioinform Adv] 2023 Apr 13; Vol. 3 (1), pp. vbad049. Date of Electronic Publication: 2023 Apr 13 (Print Publication: 2023).Publisher: Oxford University Press Country of Publication: England NLM ID: 9918282081306676 Publication Model: eCollection Cited Medium: Internet

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A balanced measure shows superior performance of pseudobulk methods in single-cell RNA-sequencing analysis.

• Authors : Murphy AE; UK Dementia Research Institute at Imperial College London, London, W12 0BZ, UK. .; Department of Brain Sciences, Imperial College London, London, W12 0BZ, UK. .

Subjects: Software* ; High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods; RNA/RNA/RNA/genetics

• Source: Nature communications [Nat Commun] 2022 Dec 22; Vol. 13 (1), pp. 7851. Date of Electronic Publication: 2022 Dec 22.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN:

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Multidimensional Dynamics of the Proteome in the Neurodegenerative and Aging Mammalian Brain.

• Authors : Andrews B; MRC Laboratory of Molecular Biology, Cambridge, UK.; Murphy AE

Subjects: Alzheimer Disease*/Alzheimer Disease*/Alzheimer Disease*/metabolism ; Proteome*/Proteome*/Proteome*/metabolism; Aging

• Source: Molecular & cellular proteomics : MCP [Mol Cell Proteomics] 2022 Feb; Vol. 21 (2), pp. 100192. Date of Electronic Publication: 2021 Dec 31.Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 101125647 Publication

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MungeSumstats: a Bioconductor package for the standardization and quality control of many GWAS summary statistics.

• Authors : Murphy AE; UK Dementia Research Institute at Imperial College London, London W12 0BZ, UK.; Department of Brain Sciences, Imperial College London, London W12 0BZ, UK.

Subjects: Genome-Wide Association Study* ; Software*; Quality Control

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2021 Dec 07; Vol. 37 (23), pp. 4593-4596.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN:

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Conditional GWAS analysis to identify disorder-specific SNPs for psychiatric disorders.

• Authors : Byrne EM; Zhu Z ...

Subjects: Attention Deficit Disorder with Hyperactivity*/Attention Deficit Disorder with Hyperactivity*/Attention Deficit Disorder with Hyperactivity*/genetics ; Bipolar Disorder*/Bipolar Disorder*/Bipolar Disorder*/genetics ; Schizophrenia*/Schizophrenia*/Schizophrenia*/genetics

• Source: Molecular psychiatry [Mol Psychiatry] 2021 Jun; Vol. 26 (6), pp. 2070-2081. Date of Electronic Publication: 2020 May 12.Publisher: Nature Publishing Group Specialist Journals Country of Publication: England NLM ID: 9607835 Publication Model: Print-Electronic Cited Medium:

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Single-Nucleus RNA-Seq Is Not Suitable for Detection of Microglial Activation Genes in Humans.

• Authors : Thrupp N; Centre for Brain and Disease Research, Flanders Institute for Biotechnology (VIB), Leuven, Belgium; Department of Neurosciences and Leuven Brain Institute, KU Leuven, Leuven, Belgium.

Subjects: Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; Microglia/Microglia/Microglia/*physiology ; Sequence Analysis, RNA/Sequence Analysis, RNA/Sequence Analysis, RNA/*methods

• Source: Cell reports [Cell Rep] 2020 Sep 29; Vol. 32 (13), pp. 108189.Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print Cited Medium: Internet ISSN: 2211-1247

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Genetic identification of cell types underlying brain complex traits yields insights into the etiology of Parkinson’s disease

• Authors : Bryois, Julien; Skene, Nathan G.; Hansen, Thomas Folkmann

• Source: Nature Genetics; May 2020, Vol. 52 Issue: 5 p482-493, 12p

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Author Correction: Genome-wide meta-analysis identifies new loci and functional pathways influencing Alzheimer’s disease risk

• Authors : Jansen, Iris E.; Savage, Jeanne E.; Watanabe, Kyoko

• Source: Nature Genetics; March 2020, Vol. 52 Issue: 3 p354-354, 1p

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Genome-wide analysis identifies molecular systems and 149 genetic loci associated with income.

• Authors : Hill WD; Centre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, 7 George Square, Edinburgh, EH8 9JZ, UK. .; Department of Psychology, University of Edinburgh, 7 George Square, Edinburgh, EH8 9JZ, UK. .

Subjects: Genome-Wide Association Study* ; Quantitative Trait Loci* ; Social Class*

• Source: Nature communications [Nat Commun] 2019 Dec 16; Vol. 10 (1), pp. 5741. Date of Electronic Publication: 2019 Dec 16.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN:

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