Novel TMEM98, MFRP, PRSS56 variants in a large United States high hyperopia and nanophthalmos cohort.

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  • Additional Information
    • Source:
      Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
    • Publication Information:
      Original Publication: London : Nature Publishing Group, copyright 2011-
    • Subject Terms:
    • Abstract:
      Nanophthalmos is a rare condition defined by a small, structurally normal eye with resultant high hyperopia. While six genes have been implicated in this hereditary condition (MFRP, PRSS56, MYRF, TMEM98, CRB1,VMD2/BEST1), the relative contribution of these to nanophthalmos or to less severe high hyperopia (≥ + 5.50 spherical equivalent) has not been fully elucidated. We collected probands and families (n = 56) with high hyperopia or nanophthalmos (≤ 21.0 mm axial length). Of 53 families that passed quality control, plausible genetic diagnoses were identified in 10/53 (18.8%) by high-throughput panel or pooled exome sequencing. These include 1 TMEM98 family (1.9%), 5 MFRP families (9.4%), and 4 PRSS56 families (7.5%), with 4 additional families having single allelic hits in MFRP or PRSS56 (7.5%). A novel deleterious TMEM98 variant (NM_015544.3, c.602G>C, p.(Arg201Pro)) segregated with disease in 4 affected members of a family. Multiple novel missense and frameshift variants in MFRP and PRSS56 were identified. PRSS56 families were more likely to have choroidal folds than other solved families, while MFRP families were more likely to have retinal degeneration. Together, this study defines the prevalence of nanophthalmos gene variants in high hyperopia and nanophthalmos and indicates that a large fraction of cases remain outside of single gene coding sequences.
    • References:
      Retina. 2015 Oct;35(10):2121-9. (PMID: 25961123)
      Am J Med Genet A. 2011 May;155A(5):1001-6. (PMID: 21484995)
      JAMA Ophthalmol. 2014 Aug;132(8):970-7. (PMID: 24852644)
      Bioinformatics. 2015 Oct 15;31(20):3359-61. (PMID: 26069263)
      JAMA Ophthalmol. 2016 Jul 1;134(7):802-9. (PMID: 27197072)
      J Cataract Refract Surg. 2004 Mar;30(3):584-90. (PMID: 15050253)
      Acta Ophthalmol. 2014 May;92(3):276-81. (PMID: 23742260)
      Sci Rep. 2020 Jan 28;10(1):1289. (PMID: 31992737)
      Nat Biotechnol. 2011 Jan;29(1):24-6. (PMID: 21221095)
      Hum Mutat. 2016 May;37(5):457-64. (PMID: 26864275)
      Invest Ophthalmol Vis Sci. 2019 Jul 1;60(8):2904-2913. (PMID: 31266062)
      Am J Ophthalmol. 2008 Aug;146(2):323-328. (PMID: 18554571)
      Nat Genet. 2018 Jun;50(6):834-848. (PMID: 29808027)
      Mol Vis. 2015 Sep 01;21:1017-23. (PMID: 26392740)
      Mol Vis. 2012;18:1165-74. (PMID: 22605927)
      Mol Vis. 2010 Mar 26;16:540-8. (PMID: 20361016)
      Invest Ophthalmol Vis Sci. 2001 May;42(6):1232-6. (PMID: 11328732)
      Eye Sci. 2013 Sep;28(3):113-8. (PMID: 24579550)
      Clin Genet. 2020 May;97(5):764-769. (PMID: 32052405)
      Hum Genet. 2019 Oct;138(10):1077-1090. (PMID: 31172260)
      J Comput Biol. 2015 Jun;22(6):498-509. (PMID: 25658651)
      Mol Vis. 2019 Sep 21;25:527-534. (PMID: 31700225)
      Am J Ophthalmol. 2013 Mar;155(3):508-517.e5. (PMID: 23218701)
      J Neurosci. 2018 Nov 14;38(46):9829-9839. (PMID: 30249802)
      Semin Ophthalmol. 2013 Sep-Nov;28(5-6):397-405. (PMID: 24138049)
      Nat Genet. 2002 Jan;30(1):97-101. (PMID: 11731797)
      Am J Hum Genet. 2016 Jun 2;98(6):1077-1081. (PMID: 27236918)
      Genet Med. 2015 May;17(5):405-24. (PMID: 25741868)
      Hum Mol Genet. 2000 Feb 12;9(3):367-74. (PMID: 10655546)
      Eur J Hum Genet. 2000 Apr;8(4):286-92. (PMID: 10854112)
      Arch Ophthalmol. 2009 May;127(5):649-55. (PMID: 19433716)
      Am J Hum Genet. 2011 Mar 11;88(3):382-90. (PMID: 21397065)
      PLoS Genet. 2019 May 2;15(5):e1008130. (PMID: 31048900)
      PLoS Genet. 2020 Apr 1;16(4):e1008583. (PMID: 32236127)
      Invest Ophthalmol Vis Sci. 2014 Aug 05;55(10):6213-23. (PMID: 25097241)
      Mol Vis. 2013 Nov 07;19:2217-26. (PMID: 24227917)
      Nucleic Acids Res. 2018 Jul 2;46(W1):W296-W303. (PMID: 29788355)
      Am J Hum Genet. 2007 Sep;81(3):559-75. (PMID: 17701901)
      Prog Retin Eye Res. 2009 May;28(3):187-205. (PMID: 19375515)
      Hum Gene Ther. 2012 Apr;23(4):367-76. (PMID: 22142163)
      Mol Vis. 2009 Sep 05;15:1794-8. (PMID: 19753314)
      Ophthalmology. 2003 Jun;110(6):1230-6. (PMID: 12799252)
      J Craniofac Surg. 2016 Nov;27(8):e793-e800. (PMID: 28005828)
      Proc Natl Acad Sci U S A. 2005 Jul 5;102(27):9553-8. (PMID: 15976030)
      J Ophthalmol. 2018 May 9;2018:2735465. (PMID: 29862063)
      Optom Vis Sci. 2016 Jan;93(1):19-26. (PMID: 26583794)
      Nat Genet. 2011 Jun;43(6):579-84. (PMID: 21532570)
      Lancet Glob Health. 2017 Dec;5(12):e1221-e1234. (PMID: 29032195)
      Ophthalmic Genet. 2005 Mar;26(1):9-15. (PMID: 15823920)
      Bioinformatics. 2019 Jun 1;35(11):1978-1980. (PMID: 30376034)
      Clin Exp Ophthalmol. 2007 May-Jun;35(4):348-54. (PMID: 17539787)
    • Grant Information:
      R01 EY011671 United States EY NEI NIH HHS; T32 HG000040 United States HG NHGRI NIH HHS; R56 EY011671 United States EY NEI NIH HHS; K12-EY022299 United States EY NEI NIH HHS; EY011671 United States EY NEI NIH HHS; K12 EY022299 United States EY NEI NIH HHS
    • Accession Number:
      0 (MFRP protein, human)
      0 (Membrane Proteins)
      0 (TMEM98 protein, human)
      EC 3.4.- (PRSS56 protein, human)
      EC 3.4.- (Serine Proteases)
    • Subject Terms:
      Hyperopia, High
    • Publication Date:
      Date Created: 20201118 Date Completed: 20210114 Latest Revision: 20220815
    • Publication Date:
      20231215
    • Accession Number:
      PMC7672112
    • Accession Number:
      10.1038/s41598-020-76725-8
    • Accession Number:
      33203948