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Academic Journal

In silico identification and characterization of effector catalogs.

  • Authors : de Jonge R; Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.

Subjects: Host-Pathogen Interactions* ; Software*; Fungal Proteins/Fungal Proteins/Fungal Proteins/*metabolism

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2012; Vol. 835, pp. 415-25.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Nanopore-Mediated Sequencing of Circular RNA.

Subjects: Nanopores* ; Nanopore Sequencing*; Humans

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2024; Vol. 2765, pp. 143-157.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Sample and Library Preparation for PacBio Long-Read Sequencing in Grapevine.

  • Authors : Salava H; Plant Functional Genomics Lab, Institute of Molecular Biotechnology, Department of Biotechnology, University of Natural Resources and Life Sciences (BOKU), Vienna, Austria.; Deák T

Subjects: Vitis*/Vitis*/Vitis*/genetics ; Gene Library* ; High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2024; Vol. 2787, pp. 183-197.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Screening and Characterization of Functional circRNAs in Neuronal Cultures.

  • Authors : Kelly D; Lab of Systems Neuroscience, Institute for Neuroscience, Department of Health Science and Technology, Swiss Federal Institute of Technology ETH, Zurich, Switzerland.; Schratt G

Subjects: RNA, Circular* ; MicroRNAs*/MicroRNAs*/MicroRNAs*/genetics; Animals

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2024; Vol. 2765, pp. 311-324.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Identification and Quantification of Microexons Using Bulk and Single-Cell RNA-Seq Data.

  • Authors : Parada GE; Wellcome Sanger Institute, Cambridge, UK.; Donnelly Centre for Cellular and Biomolecular Research and Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada.

Subjects: Alternative Splicing* ; RNA Splicing*; Exons/Exons/Exons/genetics

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2022; Vol. 2537, pp. 129-147.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database.

  • Authors : James-Zorn C; Xenbase Curation Team, Division of Developmental Biology, Cincinnati Children's Hospital, Cincinnati, OH, USA. .; Ponferrada V

Subjects: Databases, Genetic* ; Gene Expression* ; Genome*

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2018; Vol. 1757, pp. 251-305.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

AlzPathway, an Updated Map of Curated Signaling Pathways: Towards Deciphering Alzheimer's Disease Pathogenesis.

  • Authors : Ogishima S; Department of Bioclinical Informatics, Tohoku Medical Megabank Organization, Tohoku University, Miyagi, 980-8575, Japan, .; Mizuno S

Subjects: Signal Transduction*; Alzheimer Disease/Alzheimer Disease/Alzheimer Disease/*etiology ; Alzheimer Disease/Alzheimer Disease/Alzheimer Disease/*pathology

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2016; Vol. 1303, pp. 423-32.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Immunohistochemistry in surgical pathology: principles and practice.

  • Authors : Taylor CR; Department of Pathology, HMR 311, Keck School of Medicine, University of Southern California, 2011 Zonal Avenue, 90033, Los Angeles, CA, USA, .

Subjects: Immunohistochemistry/Immunohistochemistry/Immunohistochemistry/*methods ; Pathology, Surgical/Pathology, Surgical/Pathology, Surgical/*methods; Animals

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2014; Vol. 1180, pp. 81-109.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

Methods to detect transcribed pseudogenes: RNA-Seq discovery allows learning through features.

  • Authors : Valdes C; Center for Computational Science, University of Miami, Miami, FL, 33146, USA.; Capobianco E

Subjects: Transcription, Genetic*; Computational Biology/Computational Biology/Computational Biology/*methods ; Genomics/Genomics/Genomics/*methods

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2014; Vol. 1167, pp. 157-83.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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Academic Journal

The integration and annotation of the human interactome in the UniHI Database.

Subjects: Databases, Protein*; Molecular Sequence Annotation/Molecular Sequence Annotation/Molecular Sequence Annotation/*methods ; Protein Interaction Mapping/Protein Interaction Mapping/Protein Interaction Mapping/*methods

  • Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2012; Vol. 812, pp. 175-88.Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium:

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